Metabolism, Aging and Disease

Organelle Crosstalk in Aging and Disease

Organelle crosstalk

mitochondria

lysosomes

endoplasmic reticulum

peroxisomes

nucleus

multi-omics

aging

Overview

Cells work as a small machine in which the different components (organelles) are coordinated with each other, as in a car. When that coordination between organelles is lost, there is development of pathologies that affect muscles (including the heart), liver, eyes, ears, and nervous system. Our goal is to understand how cellular organelles crosstalk with each other so that we can avoid diseases caused by the loss of that coordination. We use mammalian models (mouse) and cellular (human, mouse, rat) to tackle these questions and define novel therapeutic strategies to neurodegenerative, muscular and other diseases.

Publications

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Information about journal articles, updated at 14-05-2024, from platform CIÊNCIAVITAE.

Lack of peroxisomal catalase affects heat shock response inCaenorhabditis elegans

Marina Musa; Pedro A Dionisio; Ricardo Casqueiro; Ira Milosevic; Nuno Raimundo; Anita Krisko, 2023. Life Science Alliance. 2023. https://doi.org/10.26508/lsa.202201737 . 10.26508/lsa.202201737 . Life Science Alliance

Amyloid-like aggregating proteins cause lysosomal defects in neurons via gain-of-function toxicity

Riera-Tur, I.; Schäfer, T.; Hornburg, D.; Mishra, A.; Da Silva Padilha, M.; Fernández-Mosquera, L.; Feigenbutz, D.; et al, 2022. Life Science Alliance. 3. 5. 2022. http://www.scopus.com/inward/record.url?eid=2-s2.0-85122904549&partnerID=MN8TOARS . 10.26508/lsa.202101185 . Life Science Alliance

Neuroligin-mediated neurodevelopmental defects are induced by mitochondrial dysfunction and prevented by lutein in C. elegans

Silvia Maglioni; Alfonso Schiavi; Marlen Melcher; Vanessa Brinkmann; Zhongrui Luo; Anna Laromaine; Nuno Raimundo; et al, 2022. Nature Communications. 2022. https://doi.org/10.1038/s41467-022-29972-4 . 10.1038/s41467-022-29972-4 . Nature Communications

Modulation of cellular redox environment as a novel therapeutic strategy for Parkinson's disease

Cláudia M. Deus; José Teixeira; Nuno Raimundo; Paolo Tucci; Fernanda Borges; Luciano Saso; Paulo J. Oliveira, 2022. European Journal of Clinical Investigation. 2022. https://doi.org/10.1111/eci.13820 . 10.1111/eci.13820 . European Journal of Clinical Investigation

Feeding and lipophagy: it takes guts to deliver

Nuno Raimundo, 2022. The EMBO Journal. 2022. https://doi.org/10.15252/embj.2022112180 . 10.15252/embj.2022112180 . The EMBO Journal

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

Klionsky, Daniel J.; Abdel-Aziz, Amal Kamal; Abdelfatah, Sara; Abdellatif, Mahmoud; Abdoli, Asghar; Abel, Steffen; Abeliovich, Hagai; et al, 2021. Autophagy. 1 - 382. 1. 17. 2021. http://dx.doi.org/10.1080/15548627.2020.1797280 . 10.1080/15548627.2020.1797280 . Autophagy

A mitochondria-targeted caffeic acid derivative reverts cellular and mitochondrial defects in human skin fibroblasts from male sporadic Parkinson's disease patients.

2021. Redox biology. 2021. https://europepmc.org/articles/PMC8220403 . 10.1016/j.redox.2021.102037 . Redox biology

Editorial: Autophagy and related transcription factors in liver and gut diseases

Eid, N.; Menon, M.B.; Thomes, P.; Zeng, T.; Raimundo, N.; Fernandez-Checa, J.C.; Wang, L.; et al, 2020. Frontiers in Pharmacology. 10. 2020. http://www.scopus.com/inward/record.url?eid=2-s2.0-85079427744&partnerID=MN8TOARS . 10.3389/fphar.2019.01610 . Frontiers in Pharmacology

Mitochondria–Lysosome Crosstalk: From Physiology to Neurodegeneration

Deus, Cláudia M.; Yambire, King Faisal; Oliveira, Paulo J.; Raimundo, Nuno, 2020. Trends in Molecular Medicine. 71 - 88. 1. 26. 2020. http://dx.doi.org/10.1016/j.molmed.2019.10.009 . 10.1016/j.molmed.2019.10.009 . published Trends in Molecular Medicine

Endophilin-A coordinates priming and fusion of neurosecretory vesicles via intersectin

Gowrisankaran, Sindhuja; Houy, Sébastien; del Castillo, Johanna G. Peña; Steubler, Vicky; Gelker, Monika; Kroll, Jana; Pinheiro, Paulo S.; et al, 2020. Nature Communications. 1. 11. 2020. http://dx.doi.org/10.1038/s41467-020-14993-8 . 10.1038/s41467-020-14993-8 . Nature Communications

ATP hydrolysis by yeast Hsp104 determines protein aggregate dissolution and size in vivo

Sathyanarayanan, Udhayabhaskar; Musa, Marina; Bou Dib, Peter; Raimundo, Nuno; Milosevic, Ira; Krisko, Anita, 2020. Nature Communications. 1. 11. 2020. http://dx.doi.org/10.1038/s41467-020-19104-1 . 10.1038/s41467-020-19104-1 . Nature Communications

Mitochondrial remodeling in human skin fibroblasts from sporadic male Parkinson's disease patients uncovers metabolic and mitochondrial bioenergetic defects

Deus, Cláudia M.; Pereira, Susana P.; Cunha-Oliveira, Teresa; Pereira, Francisco B.; Raimundo, Nuno; Oliveira, Paulo J., 2020. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease. 3. 1866. 2020. http://dx.doi.org/10.1016/j.bbadis.2019.165615 . 10.1016/j.bbadis.2019.165615 . published Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease

ARDD 2020: from aging mechanisms to interventions

Mkrtchyan, Garik V.; Abdelmohsen, Kotb; Andreux, Pénélope; Bagdonaite, Ieva; Barzilai, Nir; Brunak, Søren; Cabreiro, Filipe; et al, 2020. Aging. 2020. http://dx.doi.org/10.18632/aging.202454 . 10.18632/aging.202454 . Aging

Down-regulation of AMPK signaling pathway rescues hearing loss in TFB1 transgenic mice and delays age-related hearing loss

Zhao, Jingjing; Li, Gen; Zhao, Xuan; Lin, Xin; Gao, Yunge; Raimundo, Nuno; Li, Geng-Lin; et al, 2020. Aging. 2020. http://dx.doi.org/10.18632/aging.102977 . 10.18632/aging.102977 . Aging

Editorial: Mitochondrial Communication in Physiology, Disease and Aging

Raimundo, Nuno; Krisko, Anita, 2019. Frontiers in Cell and Developmental Biology. 7. 2019. http://dx.doi.org/10.3389/fcell.2019.00054 . 10.3389/fcell.2019.00054 . published Frontiers in Cell and Developmental Biology

Mitochondrial biogenesis is transcriptionally repressed in lysosomal lipid storage diseases

Yambire, King Faisal; Fernandez-Mosquera, Lorena; Steinfeld, Robert; Mühle, Christiane; Ikonen, Elina; Milosevic, Ira; Raimundo, Nuno, 2019. eLife. 8. 2019. http://dx.doi.org/10.7554/elife.39598 . 10.7554/elife.39598 . published eLife

Rapamycin administration is not a valid therapeutic strategy for every case of mitochondrial disease

Barriocanal-Casado, Eliana; Hidalgo-Gutiérrez, Agustín; Raimundo, Nuno; González-García, Pilar; Acuña-Castroviejo, Darío; Escames, Germaine; López, Luis C., 2019. EBioMedicine. 511 - 523. 42. 2019. http://dx.doi.org/10.1016/j.ebiom.2019.03.025 . 10.1016/j.ebiom.2019.03.025 . published EBioMedicine

Mitochondrial fission requires DRP1 but not dynamins

Fonseca, Tiago Branco; Sánchez-Guerrero, Ángela; Milosevic, Ira; Raimundo, Nuno, 2019. Nature. E34 - E42. 7761. 570. 2019. http://dx.doi.org/10.1038/s41586-019-1296-y . 10.1038/s41586-019-1296-y . published Nature

Mitochondrial respiratory chain deficiency inhibits lysosomal hydrolysis

Fernandez-Mosquera, Lorena; Yambire, King Faisal; Couto, Renata; Pereyra, Leonardo; Pabis, Kamil; Ponsford, Amy H.; Diogo, Cátia V.; et al, 2019. Autophagy. 1572 - 1591. 9. 15. 2019. http://dx.doi.org/10.1080/15548627.2019.1586256 . 10.1080/15548627.2019.1586256 . published Autophagy

Mitochondrial biogenesis is transcriptionally repressed in lysosomal lipid storage diseases

King Faisal Yambire; Lorena Fernandez-Mosquera; Robert Steinfeld; Christiane Mühle; Elina Ikonen; Ira Milosevic; Nuno Raimundo, 2019. eLife. 2019. https://doi.org/10.7554/eLife.39598 . 10.7554/eLife.39598 . eLife

Impaired lysosomal acidification triggers iron deficiency and inflammation in vivo

Yambire, King Faisal; Rostosky, Christine; Watanabe, Takashi; Pacheu-Grau, David; Torres-Odio, Sylvia; Sanchez-Guerrero, Angela; Senderovich, Ola; et al, 2019. eLife. 8. 2019. http://dx.doi.org/10.7554/elife.51031 . 10.7554/elife.51031 . published eLife

Heat-induced longevity in budding yeast requires respiratory metabolism and glutathione recycling

Musa, Marina; Peric, Matea; Bou Dib, Peter; Sobocanec, Sandra; Šaric, Ana; Lovric, Anita; Rudan, Marina; et al, 2018. Aging. 2407 - 2427. 9. 10. 2018. http://dx.doi.org/10.18632/aging.101560 . 10.18632/aging.101560 . published Aging

Cross-organelle communication at the core of longevity

Raimundo, Nuno; Kriško, Anita, 2018. Aging. 15 - 16. 1. 10. 2018. http://dx.doi.org/10.18632/aging.101373 . 10.18632/aging.101373 . published Aging

Mitochondrial adventures at the organelle society

Cátia V. Diogo; King Faisal Yambire; Lorena Fernández Mosquera; Tiago Branco F.; Nuno Raimundo, 2018. Biochemical and Biophysical Research Communications. 87 - 93. 1. 500. 2018. https://doi.org/10.1016/j.bbrc.2017.04.124 . 10.1016/j.bbrc.2017.04.124 . published Biochemical and Biophysical Research Communications

Recapitulation of Human Neural Microenvironment Signatures in iPSC-Derived NPC 3D Differentiation

Simão, Daniel; Silva, Marta M.; Terrasso, Ana P.; Arez, Francisca; Sousa, Marcos F.Q.; Mehrjardi, Narges Z.; Šaric, Tomo; et al, 2018. Stem Cell Reports. 552 - 564. 2. 11. 2018. http://dx.doi.org/10.1016/j.stemcr.2018.06.020 . 10.1016/j.stemcr.2018.06.020 . published Stem Cell Reports

TORC1-mediated sensing of chaperone activity alters glucose metabolism and extends lifespan

Peric, Matea; Lovric, Anita; Šaric, Ana; Musa, Marina; Bou Dib, Peter; Rudan, Marina; Nikolic, Andrea; et al, 2017. Aging Cell. 994 - 1005. 5. 16. 2017. http://dx.doi.org/10.1111/acel.12623 . 10.1111/acel.12623 . published Aging Cell

Acute and chronic mitochondrial respiratory chain deficiency differentially regulate lysosomal biogenesis

Fernández-Mosquera, Lorena; Diogo, Cátia V.; Yambire, King Faisal; Santos, Gabriela L.; Luna Sánchez, Marta; Bénit, Paule; Rustin, Pierre; et al, 2017. Scientific Reports. 1. 7. 2017. http://dx.doi.org/10.1038/srep45076 . 10.1038/srep45076 . published Scientific Reports

Crosstalk between cellular compartments protects against proteotoxicity and extends lifespan

Peric, Matea; Dib, Peter Bou; Dennerlein, Sven; Musa, Marina; Rudan, Marina; Lovric, Anita; Nikolic, Andrea; et al, 2016. Scientific Reports. 1. 6. 2016. http://dx.doi.org/10.1038/srep28751 . 10.1038/srep28751 . Scientific Reports

Endophilin-A Deficiency Induces the Foxo3a-Fbxo32 Network in the Brain and Causes Dysregulation of Autophagy and the Ubiquitin-Proteasome System

John D. Murdoch; Christine M. Rostosky; Sindhuja Gowrisankaran; Amandeep S. Arora; Sandra-Fausia Soukup; Ramon Vidal; Vincenzo Capece; et al, 2016. Cell Reports. 1071 - 1086. 4. 17. 2016. http://dx.doi.org/10.1016/j.celrep.2016.09.058 . 10.1016/j.celrep.2016.09.058 . published Cell Reports

Mechanisms of communication between mitochondria and lysosomes

Raimundo, Nuno; Fernández-Mosquera, Lorena; Yambire, King Faisal; Diogo, Cátia V., 2016. The International Journal of Biochemistry & Cell Biology. 345 - 349. 79. 2016. http://dx.doi.org/10.1016/j.biocel.2016.08.020 . 10.1016/j.biocel.2016.08.020 . published The International Journal of Biochemistry & Cell Biology

Mitochondrial DNA stress primes the antiviral innate immune response

West, A. Phillip; Khoury-Hanold, William; Staron, Matthew; Tal, Michal C.; Pineda, Cristiana M.; Lang, Sabine M.; Bestwick, Megan; et al, 2015. Nature. 553 - 557. 7548. 520. 2015. http://dx.doi.org/10.1038/nature14156 . 10.1038/nature14156 . published Nature

Auditory Pathology in a Transgenic mtTFB1 Mouse Model of Mitochondrial Deafness

McKay, Sharen E.; Yan, Wayne; Nouws, Jessica; Thormann, Maximilian J.; Raimundo, Nuno; Khan, Abdul; Santos-Sacchi, Joseph; Song, Lei; Shadel, Gerald S., 2015. The American Journal of Pathology. 3132 - 3140. 12. 185. 2015. http://dx.doi.org/10.1016/j.ajpath.2015.08.014 . 10.1016/j.ajpath.2015.08.014 . published The American Journal of Pathology

Mitochondrial pathology: stress signals from the energy factory

Raimundo, Nuno, 2014. Trends in Molecular Medicine. 282 - 292. 5. 20. 2014. http://dx.doi.org/10.1016/j.molmed.2014.01.005 . 10.1016/j.molmed.2014.01.005 . published Trends in Molecular Medicine

Epigenetic Silencing Mediates Mitochondria Stress-Induced Longevity

Schroeder, Elizabeth A.; Raimundo, Nuno; Shadel, Gerald S., 2013. Cell Metabolism. 954 - 964. 6. 17. 2013. http://dx.doi.org/10.1016/j.cmet.2013.04.003 . 10.1016/j.cmet.2013.04.003 . published Cell Metabolism

Mitochondrial Stress Engages E2F1 Apoptotic Signaling to Cause Deafness

Raimundo, Nuno; Song, Lei; Shutt, Timothy E.; McKay, Sharen E.; Cotney, Justin; Guan, Min-Xin; Gilliland, Thomas C.; et al, 2012. Cell. 716 - 726. 4. 148. 2012. http://dx.doi.org/10.1016/j.cell.2011.12.027 . 10.1016/j.cell.2011.12.027 . published Cell

Revisiting the TCA cycle: signaling to tumor formation

Raimundo, Nuno; Baysal, Bora E.; Shadel, Gerald S., 2011. Trends in Molecular Medicine. 641 - 649. 11. 17. 2011. http://dx.doi.org/10.1016/j.molmed.2011.06.001 . 10.1016/j.molmed.2011.06.001 . published Trends in Molecular Medicine

Mitochondrial myopathy induces a starvation-like response

Tyynismaa, Henna; Carroll, Christopher J.; Raimundo, Nuno; Ahola-Erkkilä, Sofia; Wenz, Tina; Ruhanen, Heini; Guse, Kilian; et al, 2010. Human Molecular Genetics. 3948 - 3958. 20. 19. 2010. http://dx.doi.org/10.1093/hmg/ddq310 . 10.1093/hmg/ddq310 . published Human Molecular Genetics

Downregulation of SRF–FOS–JUNB pathway in fumarate hydratase deficiency and in uterine leiomyomas

Raimundo, N; Vanharanta, S; Aaltonen, L A; Hovatta, I; Suomalainen, A, 2009. Oncogene. 1261 - 1273. 9. 28. 2009. http://dx.doi.org/10.1038/onc.2008.472 . 10.1038/onc.2008.472 . published Oncogene

A "radical" mitochondrial view of autophagy-related pathology

Raimundo, Nuno; Shadel, Gerald S., 2009. Aging. 354 - 356. 4. 1. 2009. http://dx.doi.org/10.18632/aging.100037 . 10.18632/aging.100037 . published Aging

Differential metabolic consequences of fumarate hydratase and respiratory chain defects

Raimundo, Nuno; Ahtinen, Jouni; Fumic, Ksenija; Baric, Ivo; Remes, Anne M.; Renkonen, Risto; Lapatto, Risto; Suomalainen, Anu, 2008. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease. 287 - 294. 5. 1782. 2008. http://dx.doi.org/10.1016/j.bbadis.2008.01.008 . 10.1016/j.bbadis.2008.01.008 . published Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease

Hepatic glutathione and nitric oxide are critical for hepatic insulin-sensitizing substance action

Guarino, Maria P.; Afonso, Ricardo A.; Raimundo, Nuno; Raposo, João F.; Macedo, M. Paula, 2003. American Journal of Physiology-Gastrointestinal and Liver Physiology. G588 - G594. 4. 284. 2003. http://dx.doi.org/10.1152/ajpgi.00423.2002 . 10.1152/ajpgi.00423.2002 . published American Journal of Physiology-Gastrointestinal and Liver Physiology

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